Geographic Programs – San Francisco Bay Water Quality Improvement Fund

SF Bay Program
CFDA 66.126 Active Grant
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Program Funding

Annual program obligations reported to SAM.gov.

Latest annual funding (estimated)
$86M FY2026
$46M
FY24
$69M
FY25
$86M
FY26*
* estimated

Funded Projects

Examples of what this program has supported.

FY2025 EPA Region 9 awarded 7 grants to fund San Francisco Bay Program Priorities. These awards utilized FY25 year funds and were awarded using a process approved by the EPA Region 9 Regional Administrator (RA) and justified by competition memos signed by the RA. Information about the grantees can be found on our website at https://www.epa.gov/sfbay-program. A Notice of Funding Opportunity for available FY25 and FY26 funds is scheduled for release in December 2025.

Program Objective

The goals of the SF Bay Restoration Program are to improve water quality and restore wetlands in the San Francisco Bay and its watersheds. Funded projects will reduce polluted run-off, restore impaired waters and enhance aquatic habitat. The SF Bay Restoration Program identifies eleven (11) program priorities as follows: the Wetlands Regional Monitoring Program, subtidal habitat restoration, the SF Bay Regional Monitoring Program for water quality, nutrient management, large-scale wetlands restoration, implementation of the PCBs TMDL , urban green stormwater infrastructure, the Bay Restoration Regulatory Integration Team, PFAS studies, shoreline resilience projects, and beneficial reuse of dredged material projects. Congressional appropriations to the U.S. Environmental Protection Agency (EPA) for the SF Bay Program are intended to fund eligible applicants with grants that invest in America’s infrastructure and deliver environmental and public health benefits.

Eligibility

Eligible Applicants

  • U.S. State Government
  • Tribal Government (other)
  • Local Government Consortium
  • Local
  • State
  • Nonprofit Organization

State, local government agencies, districts, and councils; regional water pollution control agencies; State coastal zone management agencies; Federally and non-federally recognized tribes; public and private universities and colleges, public or private non-governmental, non-profit institutions are eligible to apply, unless restricted by the authorizing statutes. Non-profit organizations must have documentation of non-profit status from the U.S. Internal Revenue Service or their state of incorporation, except that non-profits organizations as defined in Section 501(c)(4) of the Internal Revenue Code that engage in lobbying as defined in Section 3 of the Lobbying Disclosure Act of 1995 or superseding legislation are ineligible. For certain competitive funding opportunities under this assistance listing, the Agency may limit eligibility to compete to a number or subset of eligible applicants consistent with the Agency's Assistance Agreement Competition Policy.

Beneficiaries

  • Other

The outcomes from the SF Bay Restoration Program will ultimately benefit the urban resident and business populations of the nine county San Francisco Bay Area, as well as the State of California in general.

How to Apply

Award Procedure

The SF Bay Program has historically required the grants be awarded on a competitive basis. EPA will review and evaluate applications in accordance with the terms, conditions, and criteria stated in the competitive announcement. Competitions will be conducted in accordance with EPA policies/regulations for competing assistance agreements.

Decision Timeline

  • Approval: From 120 to 180 days

Approximately 180 days from receipt of application, through selection and notification, and development and approval of work plan, to award of funds.

Program details & compliance

Description

The goals of the SF Bay Restoration Program are to improve water quality and restore wetlands in the San Francisco Bay and its watersheds. Funded projects will reduce polluted run-off, restore impaired waters and enhance aquatic habitat. Achieving significant environmental results related to wetlands restoration and water quality improvements is an overall program priority.

Mission Categories

Primary: Flood Prevention and Control

Other categories:
Water Pollution ControlWater ConservationCommunity Sewage TreatmentLand and Forest Conservation

Use of Funds

Allowed Uses

Environment (water, air, solid waste, pesticides, radiation), Science and Technology Projects must demonstrate consistency with the San Francisco Bay Program Priorities and the San Francisco Estuary Partnership's Comprehensive Conservation and Management Plan (CCMP). Funded projects from eligible entities will improve water quality and restore aquatic habitat (i.e., wetlands) in San Francisco Bay and its watersheds. Assistance agreement awards under this program may involve or relate to geospatial information. Further information regarding geospatial information may be obtained by viewing the following website: Geospatial Resources at EPA (https://www.epa.gov/geospatial).This program makes Federal awards on a discretionary basis. A discretionary award means an award in which the Federal awarding agency, in keeping with specific statutory authority that enables the agency to exercise judgement (“discretion”), selects the recipient and/or the amount of Federal funding awarded through a competitive process or based on merit of proposals. A discretionary award may be selected on a non-competitive basis, as appropriate. For further information, please contact the Headquarters or regional office.

Matching Requirements

Match amounts vary depending on the award authority for the grant. Grants awarded under Section 320 of the Clean Water Act require a 50% match (grants awarded with funds from the Infrastructure Investment and Jobs Act provide EPA with the discretion of waiving the statutory non-Federal share for award of these funds); grants awarded under Section 125 of the Clean Water Act which was amended by Public Law 117-263 require a match of 25%.

Reporting & Compliance

Audit Required
Yes — Determined at Time of Award
Records Retention
3 years

Applicable 2 CFR 200 Subparts

  • Subpart B — General Provisions
  • Subpart C — Pre-Federal Award Requirements
  • Subpart D — Post-Federal Award Requirements
  • Subpart E — Cost Principles
  • Subpart F — Audit Requirements

Contacts

Luisa Valiela, Program Manager
(415) 972-3400
USEPA Region 9, 75 Hawthorne Street (WTR-2-4), San Francisco, CA 94105
Data from SAM.gov Federal Assistance Listings. Source published: 2026-02-25. Spec v2.0. Last synced: 2026-05-28 07:26:05.